Strain Overview | |
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Organism Name | Burkholderia gladioli ATCC 10248 |
Species | Burkholderia gladioli |
Strain | ATCC 10248 |
Description/Title | Microbe sample from Burkholderia gladioli |
Annotated Genes | 7308 |
Partial Genes | 99 |
Host Information | |
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Host Species Taxonomic Name |
Geographic Location | |
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Location Name | Not Available |
Isolation Source | plant |
Sample Provider | |
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Name | Shannon Johnson |
shannonj@lanl.gov | |
Institution | Los Alamos National Laboratory |
Date Collected | Not Available |
Database | Scheme | Sequence Type | Alleles | |
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Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst). |
Assembly | |
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Assembly DB |
RefSeq
|
Assembly Accession | Assembly Status | latest |
Scaffolds | |
Contigs | |
Contig N50 | |
Assembly Level | Complete Genome |
Percent GC |
Cross-References | |
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NCBI BioSample Accession | SAMN03010439 |
NCBI Taxonomy ID | 28095 |
NCBI Bioprojects |
Related Data | |
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Additional Genome Project Info | |
Sequencing Information | |
Genome Assembly Information |
Feature | Count |
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gene | 7308 |
CDS | 7223 |
pseudo | 131 |
tRNA | 69 |
rRNA | 15 |
ncRNA | 1 |
Localization | Count |
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Cytoplasmic | 3167 |
Cytoplasmic Membrane | 1532 |
Periplasmic | 217 |
Outer Membrane | 185 |
Extracellular | 121 |
Unknown | 1752 |
Unknown (This protein may have multiple localization sites) | 248 |
Flagellar | 3 |
Fimbrial | 3 |
Host Associated | 1 |
Genomic | ORF DNA | Intergenic | Amino Acid |
TSV | CSV | GBK | EMBL | GFF3 | GFF3 + sequence | GTF |