Burkholderia gladioli ATCC 10248

Strain Overview
Organism Name Burkholderia gladioli ATCC 10248
Species Burkholderia gladioli
Strain ATCC 10248
Description/Title Microbe sample from Burkholderia gladioli
Annotated Genes 7308
Partial Genes 99
Host Information
Host Species Taxonomic Name
Geographic Location
Location Name Not Available
Isolation Source plant
Sample Provider
Name Shannon Johnson
E-mail shannonj@lanl.gov
Institution Los Alamos National Laboratory
Date Collected Not Available

MLST Data

Database Scheme Sequence Type Alleles
Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst).
Assembly
Assembly DB
RefSeq
Assembly Accession
Assembly Status latest
Scaffolds
Contigs
Contig N50
Assembly Level Complete Genome
Percent GC
Cross-References
NCBI BioSample Accession SAMN03010439
NCBI Taxonomy ID 28095
NCBI Bioprojects
Related Data
Additional Genome Project Info
Sequencing Information
Genome Assembly Information
Genome Browsers*
Burkholderia gladioli strain ATCC 10248 chromosome 1, complete sequence.
Burkholderia gladioli strain ATCC 10248 chromosome 2, complete sequence.
Burkholderia gladioli strain ATCC 10248 plasmid 1, complete sequence.
Burkholderia gladioli strain ATCC 10248 plasmid 2, complete sequence.
Burkholderia gladioli strain ATCC 10248 plasmid 3, complete sequence.

Annotated Features

Feature Count
gene 7308
CDS 7223
pseudo 131
tRNA 69
rRNA 15
ncRNA 1

Subcellular Localization

Localization Count
Cytoplasmic 3167
Cytoplasmic Membrane 1532
Periplasmic 217
Outer Membrane 185
Extracellular 121
Unknown 1752
Unknown (This protein may have multiple localization sites) 248
Flagellar 3
Fimbrial 3
Host Associated 1

Replicons

5 replicons associated with this assembly

Download Sequences

Genomic ORF DNA Intergenic Amino Acid

Download Gene Annotations

TSV CSV GBK EMBL GFF3 GFF3 + sequence GTF