| Strain Overview | |
|---|---|
| Organism Name | Burkholderia thailandensis ATCC 700388 |
| Species | Burkholderia thailandensis |
| Strain | ATCC 700388 |
| Description/Title | Sample from Burkholderia thailandensis E264 |
| Annotated Genes | 5502 |
| Partial Genes | 122 |
| Host Information | |
|---|---|
| Host Species Taxonomic Name |
| Geographic Location |
|---|
| Database | Scheme | Sequence Type | Alleles | |
|---|---|---|---|---|
| Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst). | ||||
| Assembly | |
|---|---|
| Assembly DB |
RefSeq
|
| Assembly Accession | Assembly Status | latest |
| Scaffolds | |
| Contigs | 44 |
| Contig N50 | 381955 |
| Assembly Level | Chromosome |
| Percent GC |
| Cross-References | |
|---|---|
| NCBI BioSample Accession | SAMN02469820 |
| NCBI Taxonomy ID | 271848 |
| NCBI Bioprojects |
| Related Data | |
|---|---|
| Additional Genome Project Info | |
| Sequencing Information | |
| Genome Assembly Information |
| Feature | Count |
|---|---|
| gene | 5502 |
| CDS | 5273 |
| pseudo | 181 |
| tRNA | 37 |
| rRNA | 3 |
| ncRNA | 1 |
| Localization | Count |
|---|---|
| Cytoplasmic | 2232 |
| Cytoplasmic Membrane | 1052 |
| Periplasmic | 165 |
| Outer Membrane | 114 |
| Extracellular | 93 |
| Unknown | 1587 |
| Unknown (This protein may have multiple localization sites) | 144 |
| Flagellar | 26 |
| Fimbrial | 4 |
| Host Associated | 3 |
| T3SS | 4 |
| Name | Length | GC | |
|---|---|---|---|
| Burkholderia thailandensis E264 strain ATCC 700388 chromosome 1, whole genome shotgun sequence. | 3453093 bp | 67.0% |
Replicon details
|
| Burkholderia thailandensis E264 strain ATCC 700388 chromosome 2, whole genome shotgun sequence. | 2901247 bp | 67.6% |
Replicon details
|
| Genomic | ORF DNA | Intergenic | Amino Acid |
| TSV | CSV | GBK | EMBL | GFF3 | GFF3 + sequence | GTF |