Burkholderia sp. BGK BGK

Strain Overview
Organism Name Burkholderia sp. BGK BGK
Species Burkholderia sp. BGK
Strain BGK
Description/Title Microbe sample from Burkholderia sp. BGK
Annotated Genes 6223
Partial Genes 50
Host Information
Host Species Taxonomic Name
Geographic Location
Location Name unknown
Isolation Source unknown
Sample Provider
Name Hajnalka Daligault
E-mail hajkis@lanl.gov
Institution Los Alamos National Laboratory
Date Collected unknown

MLST Data

Database Scheme Sequence Type Alleles
Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst).
Assembly
Assembly DB
RefSeq
Assembly Accession
GCF_000763555.1
Assembly Status latest
Scaffolds
Contigs 2
Contig N50 4125094
Assembly Level Chromosome with gaps
Percent GC
Cross-References
NCBI BioSample Accession SAMN02902623
NCBI Taxonomy ID 1487955
NCBI Bioprojects
Related Data
Additional Genome Project Info
Sequencing Information
Genome Assembly Information
Details

Annotated Features

Feature Count
gene 6223
CDS 6105
tRNA 61
pseudo 44
rRNA 12
ncRNA 1

Subcellular Localization

Localization Count
Cytoplasmic 2543
Cytoplasmic Membrane 1223
Periplasmic 195
Outer Membrane 146
Extracellular 99
Unknown 1767
Unknown (This protein may have multiple localization sites) 178
Flagellar 25
Fimbrial 9
T3SS 5

Replicons

Name Length GC
Burkholderia sp. BGK chromosome 1, complete sequence. 4125094 bp 67.6%
Replicon details
Burkholderia sp. BGK chromosome 2. 3179106 bp 68.5%
Replicon details

Download Sequences

Genomic ORF DNA Intergenic Amino Acid

Download Gene Annotations

TSV CSV GBK EMBL GFF3 GFF3 + sequence GTF