Burkholderia mallei A188

Strain Overview
Organism Name Burkholderia mallei A188
Species Burkholderia mallei
Strain A188
Description/Title Pathogen sample from Burkholderia mallei
Annotated Genes 4262
Partial Genes 128
Host Information
Host Species Taxonomic Name
Geographic Location
Location Name unknown
Isolation Source unknown
Latitude/Longitude unknown
Sample Provider
Name Jason Sahl
E-mail jasonsahl@gmail.com
Institution Translational Genomics Research Institute
Date Collected unknown

MLST Data

Database Scheme Sequence Type Alleles
Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst).
Assembly
Assembly DB
RefSeq
Assembly Accession
Assembly Status latest
Scaffolds
Contigs 172
Contig N50 60325
Assembly Level Contig
Percent GC
Cross-References
NCBI BioSample Accession SAMN02303031
NCBI Taxonomy ID 1382517
NCBI Bioprojects
Related Data
Additional Genome Project Info
Sequencing Information
Genome Assembly Information

Annotated Features

Feature Count
gene 4262
CDS 4206
pseudo 202
tRNA 51
rRNA 4
ncRNA 1

Subcellular Localization

Localization Count
Cytoplasmic 1850
Cytoplasmic Membrane 869
Periplasmic 143
Outer Membrane 92
Extracellular 61
Unknown 1131
Unknown (This protein may have multiple localization sites) 125
Flagellar 23
Fimbrial 3
Host Associated 2
T3SS 3

Replicons

172 replicons associated with this assembly

Download Sequences

Genomic ORF DNA Intergenic Amino Acid

Download Gene Annotations

TSV CSV GBK EMBL GFF3 GFF3 + sequence GTF