Burkholderia glumae PG1

Strain Overview
Organism Name Burkholderia glumae PG1
Species Burkholderia glumae
Strain PG1
Description/Title Microbe sample from Burkholderia glumae PG1 wild type
Annotated Genes 6549
Partial Genes 309
Host Information
Host Species Taxonomic Name
Geographic Location
Location Name missing
Isolation Source missing
Sample Provider
Name G2L Team
E-mail g2l.info@uni-goettingen.de
Institution Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory
Date Collected missing

MLST Data

Database Scheme Sequence Type Alleles
Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst).
Assembly
Assembly DB
RefSeq
Assembly Accession
Assembly Status latest
Scaffolds
Contigs
Contig N50
Assembly Level Complete Genome
Percent GC
Cross-References
NCBI BioSample Accession SAMN03081274
NCBI Taxonomy ID 595500
NCBI Bioprojects
Related Data
Additional Genome Project Info
Sequencing Information
Genome Assembly Information
Genome Browsers*
Burkholderia glumae PG1 chromosome 1, complete sequence.
Burkholderia glumae PG1 chromosome 2, complete sequence.

Annotated Features

Feature Count
gene 6549
CDS 6382
pseudo 85
tRNA 66
rRNA 15
ncRNA 1

Subcellular Localization

Localization Count
Cytoplasmic 2862
Cytoplasmic Membrane 1334
Periplasmic 191
Outer Membrane 145
Extracellular 92
Unknown 1555
Unknown (This protein may have multiple localization sites) 203

Replicons

Name Length GC
Burkholderia glumae PG1 chromosome 1, complete sequence. 4163767 bp 68.4%
Replicon details
Burkholderia glumae PG1 chromosome 2, complete sequence. 3732771 bp 69.2%
Replicon details

Download Sequences

Genomic ORF DNA Intergenic Amino Acid

Download Gene Annotations

TSV CSV GBK EMBL GFF3 GFF3 + sequence GTF