Strain Overview | |
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Organism Name | Burkholderia glumae PG1 |
Species | Burkholderia glumae |
Strain | PG1 |
Description/Title | Microbe sample from Burkholderia glumae PG1 wild type |
Annotated Genes | 6549 |
Partial Genes | 309 |
Host Information | |
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Host Species Taxonomic Name |
Geographic Location | |
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Location Name | missing |
Isolation Source | missing |
Sample Provider | |
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Name | G2L Team |
g2l.info@uni-goettingen.de | |
Institution | Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory |
Date Collected | missing |
Database | Scheme | Sequence Type | Alleles | |
---|---|---|---|---|
Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst). |
Assembly | |
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Assembly DB |
RefSeq
|
Assembly Accession | Assembly Status | latest |
Scaffolds | |
Contigs | |
Contig N50 | |
Assembly Level | Complete Genome |
Percent GC |
Cross-References | |
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NCBI BioSample Accession | SAMN03081274 |
NCBI Taxonomy ID | 595500 |
NCBI Bioprojects |
Related Data | |
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Additional Genome Project Info | |
Sequencing Information | |
Genome Assembly Information |
Genome Browsers* | |
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Burkholderia glumae PG1 chromosome 1, complete sequence. | |
Burkholderia glumae PG1 chromosome 2, complete sequence. |
Feature | Count |
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gene | 6549 |
CDS | 6382 |
pseudo | 85 |
tRNA | 66 |
rRNA | 15 |
ncRNA | 1 |
Localization | Count |
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Cytoplasmic | 2862 |
Cytoplasmic Membrane | 1334 |
Periplasmic | 191 |
Outer Membrane | 145 |
Extracellular | 92 |
Unknown | 1555 |
Unknown (This protein may have multiple localization sites) | 203 |
Name | Length | GC | |
---|---|---|---|
Burkholderia glumae PG1 chromosome 1, complete sequence. | 4163767 bp | 68.4% |
Replicon details
|
Burkholderia glumae PG1 chromosome 2, complete sequence. | 3732771 bp | 69.2% |
Replicon details
|
Genomic | ORF DNA | Intergenic | Amino Acid |
TSV | CSV | GBK | EMBL | GFF3 | GFF3 + sequence | GTF |