Burkholderia cenocepacia DWS 37E-2

Strain Overview
Organism Name Burkholderia cenocepacia DWS 37E-2
Species Burkholderia cenocepacia
Strain DWS 37E-2
Description/Title Microbe sample from Burkholderia cenocepacia
Annotated Genes 5851
Partial Genes 125
Host Information
Host Species Taxonomic Name
Geographic Location
Location Name Australia
Isolation Source soil
Environmental Material (?) soil
Sample Provider
Name Hajnalka Daligault
E-mail hajkis@lanl.gov
Institution Los Alamos National Laboratory
Date Collected 2007

MLST Data

Database Scheme Sequence Type Alleles
PubMLST bcc 811
phaC
300
recA
343
gltB
375
gyrB
561
trpB
378
atpD
324
lepA
390
Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst).
Assembly
Assembly DB
RefSeq
Assembly Accession
Assembly Status latest
Scaffolds
Contigs
Contig N50
Assembly Level Complete Genome
Percent GC
Cross-References
NCBI BioSample Accession SAMN02796570
NCBI Taxonomy ID 95486
NCBI Bioprojects
Related Data
Additional Genome Project Info
Sequencing Information
Genome Assembly Information
Genome Browsers*
Burkholderia cenocepacia strain DWS 37E-2 chromosome 1, complete sequence.
Burkholderia cenocepacia strain DWS 37E-2 chromosome 2, complete sequence.
Burkholderia cenocepacia strain DWS 37E-2 chromosome 3, complete sequence.

Annotated Features

Feature Count
gene 5851
CDS 5735
tRNA 67
pseudo 30
rRNA 18
ncRNA 1

Subcellular Localization

Localization Count
Cytoplasmic 2534
Cytoplasmic Membrane 1244
Periplasmic 189
Outer Membrane 143
Extracellular 72
Unknown 1386
Unknown (This protein may have multiple localization sites) 173
Flagellar 24
Fimbrial 7
T3SS 4

Replicons

Name Length GC
Burkholderia cenocepacia strain DWS 37E-2 chromosome 1, complete sequence. 3241886 bp 66.4%
Replicon details
Burkholderia cenocepacia strain DWS 37E-2 chromosome 2, complete sequence. 2375865 bp 66.6%
Replicon details
Burkholderia cenocepacia strain DWS 37E-2 chromosome 3, complete sequence. 994670 bp 66.6%
Replicon details

Download Sequences

Genomic ORF DNA Intergenic Amino Acid

Download Gene Annotations

TSV CSV GBK EMBL GFF3 GFF3 + sequence GTF