Burkholderia glumae BGR1, bglu_1g00490 (pidS)

Gene Feature Overview

Strain	Burkholderia glumae BGR1 GCF_000022645.2|latest
Locus Tag	bglu_1g00490
NCBI Locus Tag	BGLU_RS00230
Name	pidS
Replicon	chromosome 1
Genomic location	51426 - 52979 (- strand)

Cross-References

RefSeq	WP_012734155.1
GI	238025727
Entrez	7905468
GI	238025727
INSDC	ACR27254.1
NCBI Locus Tag	BGLU_RS00230
NCBI Old Locus Tag	bglu_1g00490
RefSeq	WP_012734155.1,GeneID
UniParc	UPI0001A4B14D
UniProtKB Acc	C5A845
UniProtKB ID	C5A845_BURGB
UniRef100	UniRef100_C5A845
UniRef50	UniRef50_C5A845
UniRef90	UniRef90_C5A845

Product

Feature Type	CDS
Coding Frame	1
Product Name	PidS Product Name Confidence: Class 1
Synonyms
Evidence for Translation
Charge (pH 7)	-16.87
Kyte-Doolittle Hydrophobicity Value	-0.012
Molecular Weight (kDa)	55707.9
Isoelectric Point (pI)	4.91

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 606 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG000060 (654 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: bglu_1g00490 Search term: pidS Search term: PidS

Human Homologs

References

A conserved two-component regulatory system, PidS/PidR, globally regulates pigmentation and virulence-related phenotypes of Burkholderia glumae. Karki HS, Barphagha IK, Ham JH Mol Plant Pathol 2012 Sep;13(7):785-94 PubMed ID: 22364153