Burkholderia cenocepacia J2315, BCAL1369 (fecI)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Burkholderia cenocepacia J2315
GCF_000009485.1|latest
Locus Tag
BCAL1369
NCBI Locus TagQU43_RS43340
Name
fecI
Synonym: ecfC
Replicon chromosome 1
Genomic location 1506330 - 1506839 (+ strand)

Cross-References

RefSeq WP_006490536.1
GI 206559734
Entrez 6931674
GI 206559734
INSDC CAR51666.1
NCBI Locus Tag QU43_RS43340
NCBI Old Locus Tag BCAL1369
RefSeq WP_006490536.1,GeneID
UniParc UPI00017B9238
UniProtKB Acc B4E689
UniProtKB ID B4E689_BURCJ
UniRef100 UniRef100_A0A0D1BDK8
UniRef50 UniRef50_J7JC34
UniRef90 UniRef90_J7JC34

Product

Feature Type CDS
Coding Frame 1
Product Name
putative RNA polymerase sigma factor FecI
Product Name Confidence: Class 1
Synonyms sigma factor 70 EcfC
Evidence for Translation
Charge (pH 7) 0.35
Kyte-Doolittle Hydrophobicity Value -0.037
Molecular Weight (kDa) 18968.6
Isoelectric Point (pI) 7.13

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 148 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG006075 (556 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BCAL1369
Search term: fecI

Human Homologs

References

Architecture of Burkholderia cepacia complex sigma70 gene family: evidence of alternative primary and clade-specific factors, and genomic instability.
Menard A, de Los Santos PE, Graindorge A, Cournoyer B
BMC Genomics 2007 Sep 4;8:308
PubMed ID: 17784948