Strain |
Burkholderia cenocepacia J2315
GCF_000009485.1|latest |
Locus Tag |
BCAL0347
|
NCBI Locus Tag | QU43_RS38270 |
Name |
tssH
Synonym: clpV Synonym: clpB |
Replicon | chromosome 1 |
Genomic location | 373066 - 375735 (+ strand) |
Comment | Part of the T6SS gene cluster |
RefSeq | WP_006484392.1 |
GI | 206558753 |
Entrez | 6930892 |
GI | 206558753 |
INSDC | CAR50657.1 |
NCBI Locus Tag | QU43_RS38270 |
NCBI Old Locus Tag | BCAL0347 |
RefSeq | WP_006484392.1,GeneID |
UniParc | UPI00017B9102 |
UniProtKB Acc | B4E6R9 |
UniProtKB ID | B4E6R9_BURCJ |
UniRef100 | UniRef100_A0A0D1BGE8 |
UniRef50 | UniRef50_J7JAP2 |
UniRef90 | UniRef90_J7JAP2 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
type VI secretion system protein TssH
|
Synonyms |
putative type VI secretion system protein TssH |
Evidence for Translation | |
Charge (pH 7) | -25.53 |
Kyte-Doolittle Hydrophobicity Value | -0.164 |
Molecular Weight (kDa) | 96703.1 |
Isoelectric Point (pI) | 5.16 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 597 genera
|
Burkholderia Ortholog Group |
BG000372 (654 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: BCAL0347
Search term: tssH
Search term: type VI secretion system protein TssH
|
Ensembl
97, assembly
GRCh38.p12
|
ClpB homolog, mitochondrial AAA ATPase chaperonin [Source:HGNC Symbol;Acc:HGNC:30664]
E-value:
2.3e-40
Percent Identity:
33.8
|
Ensembl
97, assembly
GRCh38.p12
|
ClpB homolog, mitochondrial AAA ATPase chaperonin [Source:HGNC Symbol;Acc:HGNC:30664]
E-value:
2.3e-40
Percent Identity:
33.8
|
Ensembl
97, assembly
GRCh38.p12
|
ClpB homolog, mitochondrial AAA ATPase chaperonin [Source:HGNC Symbol;Acc:HGNC:30664]
E-value:
2.3e-40
Percent Identity:
33.8
|
Ensembl
97, assembly
GRCh38.p12
|
ClpB homolog, mitochondrial AAA ATPase chaperonin [Source:HGNC Symbol;Acc:HGNC:30664]
E-value:
2.3e-40
Percent Identity:
33.8
|
Ensembl
97, assembly
GRCh38.p12
|
ClpB homolog, mitochondrial AAA ATPase chaperonin [Source:HGNC Symbol;Acc:HGNC:30664]
E-value:
2.3e-40
Percent Identity:
33.8
|
A novel sensor kinase-response regulator hybrid controls biofilm formation and type VI secretion system activity in Burkholderia cenocepacia.
Aubert DF, Flannagan RS, Valvano MA
Infect Immun 2008 May;76(5):1979-91
PubMed ID: 18316384
|
Remodelling of VipA/VipB tubules by ClpV-mediated threading is crucial for type VI protein secretion.
Bönemann G, Pietrosiuk A, Diemand A, Zentgraf H, Mogk A
EMBO J 2009 Feb 18;28(4):315-25
PubMed ID: 19131969
|
Quantification of type VI secretion system activity in macrophages infected with Burkholderia cenocepacia.
Aubert DF, Hu S, Valvano MA
Microbiology 2015 Nov;161(11):2161-73
PubMed ID: 26364149
|