Burkholderia cenocepacia MC0-3, Bcenmc03_6986 (prnD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Burkholderia cenocepacia MC0-3
Locus Tag
Bcenmc03_6986
NCBI Locus TagBCENMC03_RS34865
Name
prnD
Replicon chromosome 3
Genomic location 1099862 - 1100986 (+ strand)

Cross-References

RefSeq YP_001774582.1
GI 170735468
Entrez 6125895
GI 170735468
NCBI Locus Tag BCENMC03_RS34865
NCBI Old Locus Tag Bcenmc03_6986
RefSeq YP_001774582.1
UniProtKB Acc B1K9Y7
UniProtKB ID B1K9Y7_BURCC

Product

Feature Type CDS
Coding Frame 1
Product Name
Rieske (2Fe-2S) domain-containing protein
Product Name Confidence: Class 2
Synonyms PrnD
Evidence for Translation
Charge (pH 7) 4.30
Kyte-Doolittle Hydrophobicity Value -0.228
Molecular Weight (kDa) 42138.9
Isoelectric Point (pI) 7.77

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 164 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG015300 (392 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Bcenmc03_6986
Search term: prnD

References

Diversity of cultivated endophytic bacteria from sugarcane: genetic and biochemical characterization of Burkholderia cepacia complex isolates.
Mendes R, Pizzirani-Kleiner AA, Araujo WL, Raaijmakers JM.
Appl Environ Microbiol. 2007 Nov;73(22):7259-67.
PubMed ID: 17905875