Strain |
Burkholderia cenocepacia MC0-3
GCF_000019505.1|latest |
Locus Tag |
Bcenmc03_0032
|
NCBI Locus Tag | BCENMC03_RS00185 |
Name |
ecfB
|
Replicon | chromosome 1 |
Genomic location | 47442 - 47963 (+ strand) |
RefSeq | WP_006477208.1 |
GI | 170731387 |
Entrez | 6121715 |
GI | 170731387 |
INSDC | ACA89212.1 |
NCBI Locus Tag | BCENMC03_RS00185 |
NCBI Old Locus Tag | Bcenmc03_0032 |
RefSeq | WP_006477208.1 |
UniParc | UPI00006D9CBE |
UniProtKB Acc | B1K1C4 |
UniProtKB ID | B1K1C4_BURCC |
UniRef100 | UniRef100_B1K1C4 |
UniRef50 | UniRef50_A0A0A3ZSI7 |
UniRef90 | UniRef90_G7HDC5 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
ECF subfamily RNA polymerase sigma-24 factor
|
Synonyms |
sigma factor 70 EcfB |
Evidence for Translation | |
Charge (pH 7) | 2.48 |
Kyte-Doolittle Hydrophobicity Value | -0.350 |
Molecular Weight (kDa) | 19952.5 |
Isoelectric Point (pI) | 9.65 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 445 genera
|
Burkholderia Ortholog Group |
BG000007 (617 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: Bcenmc03_0032
Search term: ecfB
Search term: ECF subfamily RNA polymerase sigma-24 factor
|
Architecture of Burkholderia cepacia complex sigma70 gene family: evidence of alternative primary and clade-specific factors, and genomic instability.
Menard A, de Los Santos PE, Graindorge A, Cournoyer B
BMC Genomics 2007 Sep 4;8:308
PubMed ID: 17784948
|