Burkholderia pseudomallei K96243, BPSS1614 (bpscD2)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1
Locus Tag
BPSS1614
Name
bpscD2
Synonym: sctD
Replicon chromosome 2
Genomic location 2189407 - 2190390 (- strand)
CommentThis gene is part of the type III secretion system T3SS-2 locus found in B. pseudomallei. B. pseudomallei T3SS-1 and T3SS-2, but not T3SS-3 contribute to pathogenicity in Solanum lycopersicum (tomato) but not human monocytic cell line THP-1. (PMID:20109238).

Cross-References

RefSeq YP_111622.1
GI 53722637
Entrez 3096788
GI 53722637
INSDC CAH39089.1
NCBI Locus Tag BPSS1614
RefSeq YP_111622.1,GeneID
UniParc UPI000043BD71
UniProtKB Acc Q63JV0
UniProtKB ID Q63JV0_BURPS
UniRef100 UniRef100_Q3JKS2
UniRef50 UniRef50_Q2T794
UniRef90 UniRef90_Q2T794

Product

Feature Type CDS
Coding Frame 1
Product Name
type III secretion system inner membrane ring component BpscD2 (T3SS-2)
Product Name Confidence: Class 2
Synonyms type III secretion protein
Evidence for Translation
Charge (pH 7) -9.37
Kyte-Doolittle Hydrophobicity Value 0.062
Molecular Weight (kDa) 33874.0
Isoelectric Point (pI) 4.96

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 6 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG017466 (451 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BPSS1614
Search term: bpscD2

References

PubMed ID: 15621426
PubMed ID: 28664152