Burkholderia pseudomallei K96243, BPSS0897

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1
GCF_000011545.1|latest
Locus Tag
BPSS0897
Name
Replicon chromosome 2
Genomic location 1188246 - 1189004 (+ strand)

Cross-References

RefSeq YP_110906.1
GI 53721921
Entrez 3096583
GI 53721921
INSDC CAH38359.1
NCBI Locus Tag BPSS0897
RefSeq YP_110906.1,GeneID
UniParc UPI000043BABC
UniProtKB Acc Q63LW5
UniProtKB ID Q63LW5_BURPS
UniRef100 UniRef100_A0A069BFA2
UniRef50 UniRef50_F8GRS1
UniRef90 UniRef90_N0AS93

Product

Feature Type CDS
Coding Frame 1
Product Name
short chain dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -0.60
Kyte-Doolittle Hydrophobicity Value 0.371
Molecular Weight (kDa) 25863.4
Isoelectric Point (pI) 6.80

Subcellular localization

Individual Mappings
Localization Confidence PMID
Extracellular Class 3
Extracellular Class 1
quantitative mass spectrometry evidence
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 652 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG003704 (793 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BPSS0897

Human Homologs

References

Quantitative proteomic analysis of Burkholderia pseudomallei Bsa type III secretion system effectors using hypersecreting mutants.
Vander Broek CW, Chalmers KJ, Stevens MP, Stevens JM
Mol Cell Proteomics 2015 Apr;14(4):905-16
PubMed ID: 25635268