Burkholderia pseudomallei K96243, BPSS0156

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1
GCF_000011545.1|latest
Locus Tag
BPSS0156
Name
Replicon chromosome 2
Genomic location 203913 - 204674 (- strand)

Cross-References

RefSeq YP_110177.1
GI 53721192
Entrez 3096420
GI 53721192
INSDC CAH37601.1
NCBI Locus Tag BPSS0156
RefSeq YP_110177.1,GeneID
UniParc UPI000043B7EC
UniProtKB Acc Q63NZ2
UniProtKB ID Q63NZ2_BURPS
UniRef100 UniRef100_Q63NZ2
UniRef50 UniRef50_A0A011Q4J1
UniRef90 UniRef90_Q63NZ2

Product

Feature Type CDS
Coding Frame 1
Product Name
short chain dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) 1.62
Kyte-Doolittle Hydrophobicity Value 0.028
Molecular Weight (kDa) 26488.7
Isoelectric Point (pI) 7.71

Subcellular localization

Individual Mappings
Localization Confidence PMID
Extracellular Class 1
quantitative mass spectrometry evidence
Extracellular Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 415 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG004349 (654 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BPSS0156

Human Homologs

References

Quantitative proteomic analysis of Burkholderia pseudomallei Bsa type III secretion system effectors using hypersecreting mutants.
Vander Broek CW, Chalmers KJ, Stevens MP, Stevens JM
Mol Cell Proteomics 2015 Apr;14(4):905-16
PubMed ID: 25635268