Burkholderia pseudomallei K96243, BPSL3401 (atpE)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1
GCF_000011545.1|latest
Locus Tag
BPSL3401
Name
atpE
Replicon chromosome 1
Genomic location 4039792 - 4040067 (- strand)

Cross-References

RefSeq YP_109994.1
GI 53721008
Entrez 3094555
GI 53721008
INSDC CAH37413.1
NCBI Locus Tag BPSL3401
RefSeq YP_109994.1,GeneID
UniParc UPI000043B735
UniProtKB Acc Q63PH5
UniProtKB ID Q63PH5_BURPS
UniRef100 UniRef100_A0A069B632
UniRef50 UniRef50_B0TQF9
UniRef90 UniRef90_D8NKS6

Product

Feature Type CDS
Coding Frame 1
Product Name
ATP synthase F0F1 subunit C
Synonyms
Evidence for Translation
Charge (pH 7) 0.92
Kyte-Doolittle Hydrophobicity Value 1.276
Molecular Weight (kDa) 9303.3
Isoelectric Point (pI) 8.22

Subcellular localization

Individual Mappings
Localization Confidence PMID
Extracellular Class 1
quantitative mass spectrometry evidence
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 172 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG000087 (654 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BPSL3401
Search term: atpE

Human Homologs

References

Quantitative proteomic analysis of Burkholderia pseudomallei Bsa type III secretion system effectors using hypersecreting mutants.
Vander Broek CW, Chalmers KJ, Stevens MP, Stevens JM
Mol Cell Proteomics 2015 Apr;14(4):905-16
PubMed ID: 25635268