Burkholderia pseudomallei K96243, BPSL3217 (rpsG)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1
GCF_000011545.1|latest
Locus Tag
BPSL3217
Name
rpsG
Replicon chromosome 1
Genomic location 3812903 - 3813373 (- strand)

Cross-References

RefSeq YP_109811.1
GI 53720825
Entrez 3093549
GI 53720825
INSDC CAH37228.1
NCBI Locus Tag BPSL3217
RefSeq YP_109811.1,GeneID
UniParc UPI000043B682
UniProtKB Acc Q63Q07
UniProtKB ID RS7_BURPS
UniRef100 UniRef100_A9ADI9
UniRef50 UniRef50_P9WH28
UniRef90 UniRef90_B2JIH0

Product

Feature Type CDS
Coding Frame 1
Product Name
30S ribosomal protein S7
Synonyms
Evidence for Translation
Charge (pH 7) 15.47
Kyte-Doolittle Hydrophobicity Value -0.563
Molecular Weight (kDa) 17685.6
Isoelectric Point (pI) 11.23

Subcellular localization

Individual Mappings
Localization Confidence PMID
Extracellular Class 1
quantitative mass spectrometry evidence
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 659 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG000254 (656 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BPSL3217
Search term: rpsG

Human Homologs

Ensembl 97, assembly GRCh38.p12
mitochondrial ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:14499]
E-value: 1.2e-13
Percent Identity: 31.8
Ensembl 97, assembly GRCh38.p12
mitochondrial ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:14499]
E-value: 1.2e-13
Percent Identity: 31.8
Ensembl 97, assembly GRCh38.p12
mitochondrial ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:14499]
E-value: 1.2e-13
Percent Identity: 31.8
Ensembl 97, assembly GRCh38.p12
mitochondrial ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:14499]
E-value: 1.2e-13
Percent Identity: 31.8

References

Quantitative proteomic analysis of Burkholderia pseudomallei Bsa type III secretion system effectors using hypersecreting mutants.
Vander Broek CW, Chalmers KJ, Stevens MP, Stevens JM
Mol Cell Proteomics 2015 Apr;14(4):905-16
PubMed ID: 25635268