Burkholderia pseudomallei K96243, BPSL3211 (rplW)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1
GCF_000011545.1|latest
Locus Tag
BPSL3211
Name
rplW
Replicon chromosome 1
Genomic location 3807205 - 3807519 (- strand)

Cross-References

RefSeq YP_109805.1
GI 53720819
Entrez 3092825
GI 53720819
INSDC CAH37222.1
NCBI Locus Tag BPSL3211
RefSeq YP_109805.1,GeneID
UniParc UPI00002841B4
UniProtKB Acc Q63Q13
UniProtKB ID RL23_BURPS
UniRef100 UniRef100_B1YRD2
UniRef50 UniRef50_Q6N4T7
UniRef90 UniRef90_B1YRD2

Product

Feature Type CDS
Coding Frame 1
Product Name
50S ribosomal protein L23
Synonyms
Evidence for Translation
Charge (pH 7) 5.20
Kyte-Doolittle Hydrophobicity Value -0.387
Molecular Weight (kDa) 11739.7
Isoelectric Point (pI) 10.14

Subcellular localization

Individual Mappings
Localization Confidence PMID
Extracellular Class 1
quantitative mass spectrometry evidence
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 577 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG000259 (655 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BPSL3211
Search term: rplW

Human Homologs

References

Quantitative proteomic analysis of Burkholderia pseudomallei Bsa type III secretion system effectors using hypersecreting mutants.
Vander Broek CW, Chalmers KJ, Stevens MP, Stevens JM
Mol Cell Proteomics 2015 Apr;14(4):905-16
PubMed ID: 25635268