Strain |
Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1
GCF_000011545.1|latest |
Locus Tag |
BPSL3079
|
Name |
cspD
|
Replicon | chromosome 1 |
Genomic location | 3673619 - 3673822 (+ strand) |
RefSeq | YP_109674.1 |
GI | 53720688 |
Entrez | 3094215 |
GI | 53720688 |
INSDC | CAH37090.1 |
NCBI Locus Tag | BPSL3079 |
RefSeq | YP_109674.1,GeneID |
UniParc | UPI000043B601 |
UniProtKB Acc | Q63QE4 |
UniProtKB ID | Q63QE4_BURPS |
UniRef100 | UniRef100_A0A069BBR7 |
UniRef50 | UniRef50_P42016 |
UniRef90 | UniRef90_D5W514 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
cold shock-like protein CspD
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | -0.78 |
Kyte-Doolittle Hydrophobicity Value | -0.375 |
Molecular Weight (kDa) | 7344.3 |
Isoelectric Point (pI) | 5.79 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 503 genera
|
Burkholderia Ortholog Group |
BG000393 (653 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: BPSL3079
Search term: cspD
Search term: cold shock-like protein CspD
|
Quantitative proteomic analysis of Burkholderia pseudomallei Bsa type III secretion system effectors using hypersecreting mutants.
Vander Broek CW, Chalmers KJ, Stevens MP, Stevens JM
Mol Cell Proteomics 2015 Apr;14(4):905-16
PubMed ID: 25635268
|