Strain |
Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1
GCF_000011545.1|latest |
Locus Tag |
BPSL1510
|
Name |
ndk
|
Replicon | chromosome 1 |
Genomic location | 1748592 - 1749017 (+ strand) |
RefSeq | YP_108130.1 |
GI | 53719144 |
Entrez | 3091685 |
GI | 53719144 |
INSDC | CAH35511.1 |
NCBI Locus Tag | BPSL1510 |
RefSeq | YP_108130.1,GeneID |
UniParc | UPI000043B027 |
UniProtKB Acc | Q63UT6 |
UniProtKB ID | NDK_BURPS |
UniRef100 | UniRef100_A3MK78 |
UniRef50 | UniRef50_Q5WGT0 |
UniRef90 | UniRef90_Q2SWE7 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
nucleoside diphosphate kinase
|
Synonyms | |
Evidence for Translation |
Detected in B. pseudomallei strain 844 using MALDI-TOF/MS analysis (16.0 kDa, pI 5.88, PMID:21960737)
|
Charge (pH 7) | -2.29 |
Kyte-Doolittle Hydrophobicity Value | -0.101 |
Molecular Weight (kDa) | 15561.6 |
Isoelectric Point (pI) | 5.70 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
4EK2 | TRANSFERASE | 04/09/12 | The structure of nucleoside diphosphate kinase (NDK) from Burkholderia thailandensis bound to deoxyadenosine monophosphate | BURKHOLDERIA THAILANDENSIS | 2.0 | X-RAY DIFFRACTION | 97.9 |
4DUT | TRANSFERASE | 02/22/12 | The structure of nucleoside diphosphate kinase (NDK) from Burkholderia thailandensis | BURKHOLDERIA THAILANDENSIS | 2.5 | X-RAY DIFFRACTION | 97.9 |
4HR2 | TRANSFERASE | 10/26/12 | Structure of nucleoside diphosphate kinase (NDK) from Burkholderia thailandensis bound to ADP | BURKHOLDERIA THAILANDENSIS | 1.95 | X-RAY DIFFRACTION | 97.9 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 598 genera
|
Burkholderia Ortholog Group |
BG001652 (653 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: BPSL1510
Search term: ndk
Search term: nucleoside diphosphate kinase
|
Ensembl
97, assembly
GRCh38.p12
|
NME/NM23 nucleoside diphosphate kinase 3 [Source:HGNC Symbol;Acc:HGNC:7851]
E-value:
9.7e-26
Percent Identity:
43.9
|
Quantitative proteomic analysis of Burkholderia pseudomallei Bsa type III secretion system effectors using hypersecreting mutants.
Vander Broek CW, Chalmers KJ, Stevens MP, Stevens JM
Mol Cell Proteomics 2015 Apr;14(4):905-16
PubMed ID: 25635268
|