Burkholderia pseudomallei K96243, BPSL1495 (rho)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1
GCF_000011545.1|latest
Locus Tag
BPSL1495
Name
rho
Replicon chromosome 1
Genomic location 1733194 - 1734456 (- strand)

Cross-References

RefSeq YP_108115.1
GI 53719129
Entrez 3094080
GI 53719129
INSDC CAH35496.1
NCBI Locus Tag BPSL1495
RefSeq YP_108115.1,GeneID
UniParc UPI000043B019
UniProtKB Acc Q63UV1
UniProtKB ID Q63UV1_BURPS
UniRef100 UniRef100_A0A069B1Y4
UniRef50 UniRef50_Q9HTV1
UniRef90 UniRef90_A1V4M1

Product

Feature Type CDS
Coding Frame 1
Product Name
transcription termination factor Rho
Synonyms
Evidence for Translation
Charge (pH 7) -0.08
Kyte-Doolittle Hydrophobicity Value -0.322
Molecular Weight (kDa) 47412.4
Isoelectric Point (pI) 6.99

Subcellular localization

Individual Mappings
Localization Confidence PMID
Extracellular Class 1
quantitative mass spectrometry evidence
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 575 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG001666 (652 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BPSL1495
Search term: rho

Human Homologs

References

Quantitative proteomic analysis of Burkholderia pseudomallei Bsa type III secretion system effectors using hypersecreting mutants.
Vander Broek CW, Chalmers KJ, Stevens MP, Stevens JM
Mol Cell Proteomics 2015 Apr;14(4):905-16
PubMed ID: 25635268