Burkholderia pseudomallei K96243, BPSL1460 (rpsR)

Gene Feature Overview

Strain	Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1 GCF_000011545.1|latest
Locus Tag	BPSL1460
Name	rpsR
Replicon	chromosome 1
Genomic location	1695456 - 1695731 (+ strand)

Cross-References

RefSeq	YP_108082.1
GI	53719096
Entrez	3091799
GI	53719096
INSDC	CAH35462.1
NCBI Locus Tag	BPSL1460
RefSeq	YP_108082.1,GeneID
UniParc	UPI000043AFF8
UniProtKB Acc	Q63UY4
UniProtKB ID	RS18_BURPS
UniRef100	UniRef100_Q1BH34
UniRef50	UniRef50_A4SVX8
UniRef90	UniRef90_B2JG20

Product

Feature Type	CDS
Coding Frame	1
Product Name	30S ribosomal protein S18
Synonyms
Evidence for Translation
Charge (pH 7)	12.43
Kyte-Doolittle Hydrophobicity Value	-0.979
Molecular Weight (kDa)	10613.2
Isoelectric Point (pI)	10.96

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543 Extracellular Class 1 quantitative mass spectrometry evidence 25635268
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 588 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG001705 (653 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BPSL1460 Search term: rpsR Search term: 30S ribosomal protein S18

Human Homologs

References

Quantitative proteomic analysis of Burkholderia pseudomallei Bsa type III secretion system effectors using hypersecreting mutants. Vander Broek CW, Chalmers KJ, Stevens MP, Stevens JM Mol Cell Proteomics 2015 Apr;14(4):905-16 PubMed ID: 25635268