Strain |
Burkholderia cenocepacia H111
GCF_000236215.2|latest |
Locus Tag |
I35_RS01730
|
NCBI Old Locus Tag | I35_0334%2CI35_0383 |
Name |
tssD
Synonym: hcp |
Replicon | chromosome 1 |
Genomic location | 353973 - 354476 (+ strand) |
Comment | Part of the T6SS gene cluster |
RefSeq | WP_006477093.1 |
GI | 493523014 |
NCBI Locus Tag | I35_RS01730 |
NCBI Old Locus Tag | I35_0334%2CI35_0383 |
RefSeq | WP_006477093.1 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
type VI secretion system protein TssD
|
Synonyms |
hypothetical protein |
Evidence for Translation | |
Charge (pH 7) | 0.88 |
Kyte-Doolittle Hydrophobicity Value | -0.526 |
Molecular Weight (kDa) | 18422.6 |
Isoelectric Point (pI) | 7.29 |
Individual Mappings | |
Additional evidence for subcellular localization |
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Results | Analysis not done |
Burkholderia Ortholog Group |
BG000368 (644 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: I35_RS01730
Search term: tssD
Search term: type VI secretion system protein TssD
|
Vibrio cholerae Hcp, a secreted protein coregulated with HlyA.
Williams SG, Varcoe LT, Attridge SR, Manning PA
Infect Immun 1996 Jan;64(1):283-9
PubMed ID: 8557353
|
A novel sensor kinase-response regulator hybrid controls biofilm formation and type VI secretion system activity in Burkholderia cenocepacia.
Aubert DF, Flannagan RS, Valvano MA
Infect Immun 2008 May;76(5):1979-91
PubMed ID: 18316384
|
Quantification of type VI secretion system activity in macrophages infected with Burkholderia cenocepacia.
Aubert DF, Hu S, Valvano MA
Microbiology 2015 Nov;161(11):2161-73
PubMed ID: 26364149
|