Burkholderia cenocepacia K56-2Valvano, BURCENK562V_RS19275 (virD4)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Burkholderia cenocepacia K56-2Valvano
Locus Tag
BURCENK562V_RS19275
NCBI Old Locus TagBURCENK562V_C5446
Name
virD4
Replicon ctg7180000002940B
Genomic location 3021714 - 3023426 (+ strand)
CommentThis gene is part of the B. cenocepacia K56-2 VirB-VirD-like type IV secretion system cluster.

Cross-References

RefSeq WP_034195676.1
GI 736050033
GI 736050033
NCBI Locus Tag BURCENK562V_RS19275
NCBI Old Locus Tag BURCENK562V_C5446
RefSeq WP_034195676.1

Product

Feature Type CDS
Coding Frame 1
Product Name
type IV secretion system-coupling protein VirD4
Product Name Confidence: Class 2
Synonyms type IV secretory pathway protein VirD4
Evidence for Translation
Charge (pH 7) 1.83
Kyte-Doolittle Hydrophobicity Value -0.222
Molecular Weight (kDa) 63696.0
Isoelectric Point (pI) 7.60

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG018630 (57 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: virD4

References

Involvement of a plasmid-encoded type IV secretion system in the plant tissue watersoaking phenotype of Burkholderia cenocepacia.
Engledow AS, Medrano EG, Mahenthiralingam E, LiPuma JJ, Gonzalez CF.
J Bacteriol. 2004 Sep;186(18):6015-24.
PubMed ID: 15342570
Two type IV secretion systems with different functions in Burkholderia cenocepacia K56-2.
Zhang R, LiPuma JJ, Gonzalez CF.
Microbiology. 2009 Dec;155(Pt 12):4005-13.
PubMed ID: 19744991