Burkholderia cenocepacia K56-2Valvano, BURCENK562V_RS28230

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Burkholderia cenocepacia K56-2Valvano
GCF_000333155.2|latest
Locus Tag
BURCENK562V_RS28230
NCBI Old Locus TagBURCENK562V_C6647
Name
Synonym: bcsM
Replicon ctg7180000002941
Genomic location 445264 - 445890 (+ strand)
CommentPart of the T6SS gene cluster

Cross-References

RefSeq WP_012492309.1
GI 501468864
GI 501468864
NCBI Locus Tag BURCENK562V_RS28230
NCBI Old Locus Tag BURCENK562V_C6647
RefSeq WP_012492309.1

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Product Name Confidence: Class 2
Synonyms
Evidence for Translation
Charge (pH 7) 6.41
Kyte-Doolittle Hydrophobicity Value -0.268
Molecular Weight (kDa) 21534.1
Isoelectric Point (pI) 10.08

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG000365 (627 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:

Human Homologs

References

A novel sensor kinase-response regulator hybrid controls biofilm formation and type VI secretion system activity in Burkholderia cenocepacia.
Aubert DF, Flannagan RS, Valvano MA
Infect Immun 2008 May;76(5):1979-91
PubMed ID: 18316384
Quantification of type VI secretion system activity in macrophages infected with Burkholderia cenocepacia.
Aubert DF, Hu S, Valvano MA
Microbiology 2015 Nov;161(11):2161-73
PubMed ID: 26364149