Burkholderia cenocepacia K56-2Valvano, BURCENK562V_RS34665 (ptwF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Burkholderia cenocepacia K56-2Valvano
Locus Tag
BURCENK562V_RS34665
NCBI Old Locus TagBURCENK562V_C0081
Name
ptwF
Replicon ctg7180000002935
Genomic location 45015 - 45848 (- strand)
CommentThis gene is part of the B. cenocepacia K56-2 plasmid-encoded ptw type IV secretion cluster.

Cross-References

RefSeq WP_006487410.1
GI 493533430
GI 493533430
NCBI Locus Tag BURCENK562V_RS34665
NCBI Old Locus Tag BURCENK562V_C0081
RefSeq WP_006487410.1

Product

Feature Type CDS
Coding Frame 1
Product Name
conjugal transfer protein TraF
Synonyms
Evidence for Translation
Charge (pH 7) -5.68
Kyte-Doolittle Hydrophobicity Value -0.293
Molecular Weight (kDa) 30465.1
Isoelectric Point (pI) 5.33

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG007443 (40 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: ptwF

References

PubMed ID: 27200362
Involvement of a plasmid-encoded type IV secretion system in the plant tissue watersoaking phenotype of Burkholderia cenocepacia.
Engledow AS, Medrano EG, Mahenthiralingam E, LiPuma JJ, Gonzalez CF.
J Bacteriol. 2004 Sep;186(18):6015-24.
PubMed ID: 15342570
Two type IV secretion systems with different functions in Burkholderia cenocepacia K56-2.
Zhang R, LiPuma JJ, Gonzalez CF.
Microbiology. 2009 Dec;155(Pt 12):4005-13.
PubMed ID: 19744991
A type IV secretion system contributes to intracellular survival and replication of Burkholderia cenocepacia.
Sajjan SU, Carmody LA, Gonzalez CF, LiPuma JJ.
Infect Immun. 2008 Dec;76(12):5447-55.
PubMed ID: 18824538