Burkholderia pseudomallei 1026b, BP1026B_II0540 (hmqF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Burkholderia pseudomallei 1026b - Assembly GCF_000260515.1
Locus Tag
BP1026B_II0540
NCBI Locus TagBP1026B_RS21275
Name
hmqF
Replicon chromosome 2
Genomic location 663470 - 667303 (+ strand)
CommentBelongs to the HMAQ biosynthesis operon hmqABCDEFG

Cross-References

RefSeq WP_004553201.1
GI
Entrez 12833198
NCBI Locus Tag BP1026B_RS21275
NCBI Old Locus Tag BP1026B_II0540
RefSeq WP_004553201.1

Product

Feature Type CDS
Coding Frame 1
Product Name
polyketide synthase
Product Name Confidence: Class 1
Synonyms
Evidence for Translation
Charge (pH 7) -10.48
Kyte-Doolittle Hydrophobicity Value -0.086
Molecular Weight (kDa) 137284.6
Isoelectric Point (pI) 6.30

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 588 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG017410 (460 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BP1026B_II0540
Search term: hmqF

Human Homologs

Ensembl 86, assembly GRCh38.p7
acyl-CoA synthetase family member 3 [Source:HGNC Symbol;Acc:HGNC:27288]
E-value: 2.4e-16
Percent Identity: 22.7

References

PubMed ID: 18539738
PubMed ID: 28676791