Burkholderia cenocepacia AU 1054, BCEN_RS13115

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Burkholderia cenocepacia AU 1054
GCF_000014085.1|latest
Locus Tag
BCEN_RS13115
NCBI Old Locus TagBcen_2631
Name
Replicon chromosome 1
Genomic location 2896514 - 2897635 (- strand)

Cross-References

RefSeq WP_011546577.1
GI 499865843
NCBI Locus Tag BCEN_RS13115
NCBI Old Locus Tag Bcen_2631
RefSeq WP_011546577.1

Product

Feature Type CDS
Coding Frame NA
Product Name
type VI secretion protein ImpA
Synonyms
Evidence for Translation
Charge (pH 7) -25.59
Kyte-Doolittle Hydrophobicity Value -0.439
Molecular Weight (kDa) 41675.9
Isoelectric Point (pI) 4.41

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
6H8E TRANSPORT PROTEIN 08/02/18 Truncated derivative of the C-terminal domain of the TssA component of the type VI secretion system from Burkholderia cenocepacia BURKHOLDERIA CENOCEPACIA H111 2.35 X-RAY DIFFRACTION 100.0
6HS6 TRANSPORT PROTEIN 09/28/18 C-terminal domain of the TssA component of the type VI secretion system from Burkholderia cenocepacia BURKHOLDERIA CENOCEPACIA H111 3.08 X-RAY DIFFRACTION 98.6
6HS5 TRANSPORT PROTEIN 09/28/18 N-terminal domain including the conserved ImpA_N region of the TssA component of the type VI secretion system from Burkholderia cenocepacia BURKHOLDERIA CENOCEPACIA H111 1.8 X-RAY DIFFRACTION 98.8
6H8F TRANSPORT PROTEIN 08/02/18 Fragment of the C-terminal domain of the TssA component of the type VI secretion system from Burkholderia cenocepacia BURKHOLDERIA CENOCEPACIA H111 1.78 X-RAY DIFFRACTION 98.6

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG000373 (645 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BCEN_RS13115

Human Homologs

References

No references are associated with this feature.