Burkholderia cenocepacia J2315, BCAS0245 (rpsU)

Gene Feature Overview

Strain	Burkholderia cenocepacia J2315 GCF_000009485.1|latest
Locus Tag	BCAS0245
NCBI Locus Tag	QU43_RS69910
Name	rpsU
Replicon	chromosome 3
Genomic location	274648 - 274860 (- strand)

Cross-References

RefSeq	WP_006485562.1
GI	197295095
Entrez	6804147
GI	197295095
INSDC	CAR57178.1
NCBI Locus Tag	QU43_RS69910
NCBI Old Locus Tag	BCAS0245
RefSeq	WP_006485562.1,GeneID
UniParc	UPI00017BB26D
UniProtKB Acc	B4EQ12
UniProtKB ID	B4EQ12_BURCJ
UniRef100	UniRef100_B4EQ12
UniRef50	UniRef50_Q2T6K1
UniRef90	UniRef90_Q1BIU1

Product

Feature Type	CDS
Coding Frame	1
Product Name	30S ribosomal protein S21
Synonyms
Evidence for Translation
Charge (pH 7)	13.98
Kyte-Doolittle Hydrophobicity Value	-1.099
Molecular Weight (kDa)	8395.8
Isoelectric Point (pI)	12.06

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543 Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 337 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG005039 (534 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BCAS0245 Search term: rpsU Search term: 30S ribosomal protein S21

Human Homologs

References