Burkholderia cenocepacia J2315, BCAM2831 (shc)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Burkholderia cenocepacia J2315
GCF_000009485.1|latest
Locus Tag
BCAM2831
NCBI Locus TagQU43_RS68610
Name
shc
Replicon chromosome 2
Genomic location 3205878 - 3207851 (- strand)

Cross-References

RefSeq WP_006482092.1
GI 206564668
Entrez 6930317
GI 206564668
INSDC CAR56694.1
NCBI Locus Tag QU43_RS68610
NCBI Old Locus Tag BCAM2831
RefSeq WP_006482092.1,GeneID
UniParc UPI00017BA3FF
UniProtKB Acc B4EM09
UniProtKB ID B4EM09_BURCJ
UniRef100 UniRef100_B4EM09
UniRef50 UniRef50_P54924
UniRef90 UniRef90_B4EM09

Product

Feature Type CDS
Coding Frame 1
Product Name
squalene--hopene cyclase
Synonyms
Evidence for Translation
Charge (pH 7) -7.97
Kyte-Doolittle Hydrophobicity Value -0.264
Molecular Weight (kDa) 73264.5
Isoelectric Point (pI) 5.95

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 96 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG004404 (654 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BCAM2831
Search term: shc

Human Homologs

References

No references are associated with this feature.