Burkholderia cenocepacia J2315, BCAM0022

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Burkholderia cenocepacia J2315
GCF_000009485.1|latest
Locus Tag
BCAM0022
NCBI Locus TagQU43_RS54510
Name
Replicon chromosome 2
Genomic location 22692 - 23477 (- strand)

Cross-References

RefSeq WP_006485158.1
GI 206561892
Entrez 6927836
GI 206561892
INSDC CAR53877.1
NCBI Locus Tag QU43_RS54510
NCBI Old Locus Tag BCAM0022
RefSeq WP_006485158.1,GeneID
UniParc UPI00017B9A96
UniProtKB Acc B4EG08
UniProtKB ID B4EG08_BURCJ
UniRef100 UniRef100_A0A095E4V6
UniRef50 UniRef50_A3P2I2
UniRef90 UniRef90_A3P2I2

Product

Feature Type CDS
Coding Frame 1
Product Name
3-hydroxybutyrate dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -2.11
Kyte-Doolittle Hydrophobicity Value 0.149
Molecular Weight (kDa) 27382.2
Isoelectric Point (pI) 6.51

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
4TRR OXIDOREDUCTASE 06/17/14 Crystal structure of a putative Putative D-beta-hydroxybutyrate dehydrogenase from Burkholderia cenocepacia J2315 BURKHOLDERIA CENOCEPACIA 1.9 X-RAY DIFFRACTION 100.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 652 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG002100 (695 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BCAM0022

Human Homologs

Ensembl 97, assembly GRCh38.p12
retinol dehydrogenase 8 [Source:NCBI gene;Acc:50700]
E-value: 9.2e-06
Percent Identity: 25.1
Ensembl 97, assembly GRCh38.p12
retinol dehydrogenase 8 [Source:NCBI gene;Acc:50700]
E-value: 9.2e-06
Percent Identity: 25.1

References

No references are associated with this feature.