Burkholderia cenocepacia J2315, BCAL3388 (gapA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Burkholderia cenocepacia J2315
GCF_000009485.1|latest
Locus Tag
BCAL3388
NCBI Locus TagQU43_RS53640
Name
gapA
Replicon chromosome 1
Genomic location 3712243 - 3713253 (- strand)

Cross-References

RefSeq WP_006485712.1
GI 206561725
Entrez 6933184
GI 206561725
INSDC CAR53711.1
NCBI Locus Tag QU43_RS53640
NCBI Old Locus Tag BCAL3388
RefSeq WP_006485712.1,GeneID
UniParc UPI00017B9912
UniProtKB Acc B4EEX6
UniProtKB ID B4EEX6_BURCJ
UniRef100 UniRef100_A0A071MIV2
UniRef50 UniRef50_Q27890
UniRef90 UniRef90_Q2SZA6

Product

Feature Type CDS
Coding Frame 1
Product Name
glyceraldehyde 3-phosphate dehydrogenase 1
Synonyms
Evidence for Translation
Charge (pH 7) -1.69
Kyte-Doolittle Hydrophobicity Value -0.143
Molecular Weight (kDa) 36211.7
Isoelectric Point (pI) 6.68

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
3GNQ OXIDOREDUCTASE 03/17/09 Crystal structure of glyceraldehyde-3-phosphate dehydrogenase, type I from Burkholderia pseudomallei BURKHOLDERIA PSEUDOMALLEI 2.4 X-RAY DIFFRACTION 97.6

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 607 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG000523 (655 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BCAL3388
Search term: gapA

Human Homologs

Ensembl 97, assembly GRCh38.p12
glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
E-value: 7.1e-83
Percent Identity: 49.1
Ensembl 97, assembly GRCh38.p12
glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
E-value: 7.1e-83
Percent Identity: 49.1
Ensembl 97, assembly GRCh38.p12
glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
E-value: 7.1e-83
Percent Identity: 49.1

References

No references are associated with this feature.