Burkholderia cenocepacia J2315, BCAL0983 (rluC2)

Gene Feature Overview

Strain	Burkholderia cenocepacia J2315 GCF_000009485.1|latest
Locus Tag	BCAL0983
NCBI Locus Tag	QU43_RS41480
Name	rluC2
Replicon	chromosome 1
Genomic location	1073321 - 1074325 (+ strand)

Cross-References

RefSeq	WP_006488632.1
GI	206559376
Entrez	6934052
GI	206559376
NCBI Locus Tag	QU43_RS41480
NCBI Old Locus Tag	BCAL0983
RefSeq	WP_006488632.1,GeneID
UniProtKB Acc	B4EAJ5
UniProtKB ID	B4EAJ5_BURCJ

Product

Feature Type	CDS
Coding Frame	1
Product Name	ribosomal large subunit pseudouridine synthase C 2
Synonyms
Evidence for Translation
Charge (pH 7)	13.80
Kyte-Doolittle Hydrophobicity Value	-0.307
Molecular Weight (kDa)	37387.7
Isoelectric Point (pI)	10.18

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 590 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG000953 (655 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BCAL0983 Search term: rluC2 Search term: ribosomal large subunit pseudouridine synthase C 2

Human Homologs

Ensembl 97, assembly GRCh38.p12

ENSP00000433065 RNA pseudouridine synthase D4 [Source:HGNC Symbol;Acc:HGNC:25898] E-value: 7.4e-16 Percent Identity: 31.2

References