Burkholderia cenocepacia J2315, BCAL0548 (dppF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Burkholderia cenocepacia J2315
GCF_000009485.1|latest
Locus Tag
BCAL0548
NCBI Locus TagQU43_RS39305
Name
dppF
Replicon chromosome 1
Genomic location 601365 - 602378 (+ strand)

Cross-References

RefSeq WP_006489146.1
GI 206558949
Entrez 6933516
GI 206558949
INSDC CAR50858.1
NCBI Locus Tag QU43_RS39305
NCBI Old Locus Tag BCAL0548
RefSeq WP_006489146.1,GeneID
UniParc UPI00017B9024
UniProtKB Acc B4E8J1
UniProtKB ID B4E8J1_BURCJ
UniRef100 UniRef100_A0A095FYK9
UniRef50 UniRef50_P37313
UniRef90 UniRef90_Q39C34

Product

Feature Type CDS
Coding Frame 1
Product Name
dipeptide transporter ATP-binding subunit
Synonyms
Evidence for Translation
Charge (pH 7) 6.26
Kyte-Doolittle Hydrophobicity Value -0.263
Molecular Weight (kDa) 37157.2
Isoelectric Point (pI) 8.72

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG002866 (655 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BCAL0548
Search term: dppF

Human Homologs

Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 7.2e-19
Percent Identity: 31.1
Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 7.2e-19
Percent Identity: 31.1
Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 7.2e-19
Percent Identity: 31.1
Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 7.2e-19
Percent Identity: 31.1

References

No references are associated with this feature.