Burkholderia cenocepacia J2315, BCAL0507 (dapF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Burkholderia cenocepacia J2315
GCF_000009485.1|latest
Locus Tag
BCAL0507
NCBI Locus TagQU43_RS39100
Name
dapF
Replicon chromosome 1
Genomic location 558272 - 559201 (- strand)

Cross-References

RefSeq YP_002229668.1
GI 206558908
Entrez 6931012
GI 206558908
INSDC CAR50817.1
NCBI Locus Tag QU43_RS39100
NCBI Old Locus Tag BCAL0507
RefSeq YP_002229668.1
UniParc UPI00017B8FD7
UniProtKB Acc B4E7Z8
UniProtKB ID B4E7Z8_BURCJ
UniRef100 UniRef100_B4E7Z8
UniRef50 UniRef50_Q88CF3
UniRef90 UniRef90_A4JIQ6

Product

Feature Type CDS
Coding Frame 1
Product Name
diaminopimelate epimerase
Synonyms
Evidence for Translation
Charge (pH 7) -3.25
Kyte-Doolittle Hydrophobicity Value -0.081
Molecular Weight (kDa) 33055.4
Isoelectric Point (pI) 6.31

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 550 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG002908 (653 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BCAL0507
Search term: dapF

Human Homologs

References

No references are associated with this feature.