Burkholderia cenocepacia J2315, BCAL0396 (trpC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Burkholderia cenocepacia J2315
GCF_000009485.1|latest
Locus Tag
BCAL0396
NCBI Locus TagQU43_RS38515
Name
trpC
Replicon chromosome 1
Genomic location 429520 - 430305 (- strand)

Cross-References

RefSeq WP_006482074.1
GI 206558802
Entrez 6930934
GI 206558802
INSDC CAR50707.1
NCBI Locus Tag QU43_RS38515
NCBI Old Locus Tag BCAL0396
RefSeq WP_006482074.1,GeneID
UniParc UPI00017B8EB1
UniProtKB Acc B4E7A7
UniProtKB ID B4E7A7_BURCJ
UniRef100 UniRef100_B4E7A7
UniRef50 UniRef50_Q9K192
UniRef90 UniRef90_A4JB67

Product

Feature Type CDS
Coding Frame 1
Product Name
indole-3-glycerol-phosphate synthase
Synonyms
Evidence for Translation
Charge (pH 7) -7.61
Kyte-Doolittle Hydrophobicity Value 0.113
Molecular Weight (kDa) 28536.5
Isoelectric Point (pI) 5.04

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 584 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG000421 (655 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BCAL0396
Search term: trpC

Human Homologs

References

No references are associated with this feature.