Burkholderia cenocepacia J2315, BCAL0374 (prfA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Burkholderia cenocepacia J2315
GCF_000009485.1|latest
Locus Tag
BCAL0374
NCBI Locus TagQU43_RS38400
Name
prfA
Replicon chromosome 1
Genomic location 405125 - 406207 (- strand)

Cross-References

RefSeq WP_006494405.1
GI 206558779
Entrez 6933701
GI 206558779
INSDC CAR50684.1
NCBI Locus Tag QU43_RS38400
NCBI Old Locus Tag BCAL0374
RefSeq WP_006494405.1,GeneID
UniParc UPI00017B9174
UniProtKB Acc B4E6U6
UniProtKB ID RF1_BURCJ
UniRef100 UniRef100_B4E6U6
UniRef50 UniRef50_Q2KZZ3
UniRef90 UniRef90_Q2SUG2

Product

Feature Type CDS
Coding Frame 1
Product Name
peptide chain release factor 1
Synonyms
Evidence for Translation
Charge (pH 7) -8.63
Kyte-Doolittle Hydrophobicity Value -0.624
Molecular Weight (kDa) 40499.1
Isoelectric Point (pI) 5.51

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 593 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG000399 (654 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BCAL0374
Search term: prfA

Human Homologs

Ensembl 97, assembly GRCh38.p12
mitochondrial translational release factor 1 like [Source:HGNC Symbol;Acc:HGNC:21051]
E-value: 1.1e-70
Percent Identity: 45.3

References

No references are associated with this feature.