Burkholderia cenocepacia J2315, BCAL0252 (rpmD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Burkholderia cenocepacia J2315
GCF_000009485.1|latest
Locus Tag
BCAL0252
NCBI Locus TagQU43_RS37795
Name
rpmD
Replicon chromosome 1
Genomic location 283726 - 283908 (+ strand)

Cross-References

RefSeq WP_006400644.1
GI 206558659
Entrez 6934104
GI 206558659
INSDC CAR50563.1
NCBI Locus Tag QU43_RS37795
NCBI Old Locus Tag BCAL0252
RefSeq WP_006400644.1,GeneID
UniParc UPI000052EAE1
UniProtKB Acc B4E5D8
UniProtKB ID RL30_BURCJ
UniRef100 UniRef100_B1YRP7
UniRef50 UniRef50_P44366
UniRef90 UniRef90_Q1LI55

Product

Feature Type CDS
Coding Frame 1
Product Name
50S ribosomal protein L30
Synonyms
Evidence for Translation
Charge (pH 7) 7.22
Kyte-Doolittle Hydrophobicity Value -0.045
Molecular Weight (kDa) 6634.8
Isoelectric Point (pI) 11.62

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 449 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG000275 (655 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BCAL0252
Search term: rpmD

Human Homologs

References

No references are associated with this feature.