Burkholderia cenocepacia J2315, BCAL0249 (rplF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Burkholderia cenocepacia J2315
GCF_000009485.1|latest
Locus Tag
BCAL0249
NCBI Locus TagQU43_RS37780
Name
rplF
Replicon chromosome 1
Genomic location 282269 - 282799 (+ strand)

Cross-References

RefSeq WP_006477184.1
GI 206558656
Entrez 6934107
GI 206558656
INSDC CAR50560.1
NCBI Locus Tag QU43_RS37780
NCBI Old Locus Tag BCAL0249
RefSeq WP_006477184.1,GeneID
UniParc UPI000052E58C
UniProtKB Acc B4E5D5
UniProtKB ID RL6_BURCJ
UniRef100 UniRef100_Q1BRW3
UniRef50 UniRef50_Q9K1I3
UniRef90 UniRef90_Q2SU42

Product

Feature Type CDS
Coding Frame 1
Product Name
50S ribosomal protein L6
Synonyms
Evidence for Translation
Charge (pH 7) 7.71
Kyte-Doolittle Hydrophobicity Value -0.255
Molecular Weight (kDa) 18688.5
Isoelectric Point (pI) 10.29

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 638 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG000272 (655 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BCAL0249
Search term: rplF

Human Homologs

References

No references are associated with this feature.