Burkholderia cenocepacia J2315, BCAL0235a (rplD)

Gene Feature Overview

Strain	Burkholderia cenocepacia J2315 GCF_000009485.1|latest
Locus Tag	BCAL0235a
NCBI Locus Tag	QU43_RS37710
Name	rplD
Replicon	chromosome 1
Genomic location	275882 - 276502 (+ strand)

Cross-References

RefSeq	WP_006482894.1
GI	206558642
Entrez	6934061
GI	206558642
INSDC	CAR50546.1
NCBI Locus Tag	QU43_RS37710
NCBI Old Locus Tag	BCAL0235a
RefSeq	WP_006482894.1,GeneID
UniParc	UPI00017B8FF8
UniProtKB Acc	B4E5C1
UniProtKB ID	RL4_BURCJ
UniRef100	UniRef100_B4E5C1
UniRef50	UniRef50_Q1H4N6
UniRef90	UniRef90_A3MRV5

Product

Feature Type	CDS
Coding Frame	1
Product Name	50S ribosomal protein L4
Synonyms
Evidence for Translation
Charge (pH 7)	8.16
Kyte-Doolittle Hydrophobicity Value	-0.351
Molecular Weight (kDa)	23008.3
Isoelectric Point (pI)	10.08

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 591 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG000258 (655 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BCAL0235a Search term: rplD Search term: 50S ribosomal protein L4

Human Homologs

References