Burkholderia cenocepacia J2315, BCAL0227 (rpoC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Burkholderia cenocepacia J2315
Locus Tag
BCAL0227
NCBI Locus TagQU43_RS37670
Name
rpoC
Replicon chromosome 1
Genomic location 263377 - 267618 (+ strand)

Cross-References

RefSeq WP_006482896.1
GI 206558634
Entrez 6930839
GI 206558634
INSDC CAR50538.1
NCBI Locus Tag QU43_RS37670
NCBI Old Locus Tag BCAL0227
RefSeq WP_006482896.1,GeneID
UniParc UPI00017B8FF6
UniProtKB Acc B4E5B3
UniProtKB ID RPOC_BURCJ
UniRef100 UniRef100_B4E5B3
UniRef50 UniRef50_A9GRB4
UniRef90 UniRef90_Q13TG3

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA-directed RNA polymerase subunit beta'
Synonyms
Evidence for Translation
Charge (pH 7) -1.69
Kyte-Doolittle Hydrophobicity Value -0.230
Molecular Weight (kDa) 156178.2
Isoelectric Point (pI) 6.83

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 667 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG000251 (655 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BCAL0227
Search term: rpoC

Human Homologs

Ensembl 86, assembly GRCh38.p7
RNA polymerase II subunit A [Source:HGNC Symbol;Acc:HGNC:9187]
E-value: 1.5e-43
Percent Identity: 22.7

References

No references are associated with this feature.