Burkholderia cenocepacia J2315, BCAM0221

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:PS00622	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0000160	phosphorelay signal transduction system	ISM Inferred from Sequence Model Term mapped from: InterPro:cd00156	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003677	DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF46894	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	bcj02020	Two-component system	73.0+/03-31, Mar 15	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF00196	Bacterial regulatory proteins, luxR family	IPR000792	Transcription regulator LuxR, C-terminal	158	212	7.1E-17
SMART	SM00421		IPR000792	Transcription regulator LuxR, C-terminal	155	212	2.0E-17
CDD	cd06170	LuxR_C_like	IPR000792	Transcription regulator LuxR, C-terminal	158	214	3.63213E-17
PRINTS	PR00038	LuxR bacterial regulatory protein HTH signature	IPR000792	Transcription regulator LuxR, C-terminal	188	200	1.1E-9
ProSiteProfiles	PS50043	LuxR-type HTH domain profile.	IPR000792	Transcription regulator LuxR, C-terminal	151	216	24.143
ProSiteProfiles	PS50110	Response regulatory domain profile.	IPR001789	Signal transduction response regulator, receiver domain	7	126	21.401
CDD	cd00156	REC	IPR001789	Signal transduction response regulator, receiver domain	10	126	8.72129E-14
SUPERFAMILY	SSF52172		IPR011006	CheY-like superfamily	6	138	3.56E-19
PRINTS	PR00038	LuxR bacterial regulatory protein HTH signature	IPR000792	Transcription regulator LuxR, C-terminal	158	172	1.1E-9
Pfam	PF00072	Response regulator receiver domain	IPR001789	Signal transduction response regulator, receiver domain	8	122	5.7E-14
Gene3D	G3DSA:3.40.50.12740				6	218	7.1E-43
SUPERFAMILY	SSF46894		IPR016032	Signal transduction response regulator, C-terminal effector	149	218	2.35E-19
ProSitePatterns	PS00622	LuxR-type HTH domain signature.	IPR000792	Transcription regulator LuxR, C-terminal	172	199	-
SMART	SM00448		IPR001789	Signal transduction response regulator, receiver domain	6	122	6.7E-10
PRINTS	PR00038	LuxR bacterial regulatory protein HTH signature	IPR000792	Transcription regulator LuxR, C-terminal	172	188	1.1E-9

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.