Burkholderia cenocepacia J2315, BCAL0815

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0001530 lipopolysaccharide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03002
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0042597 periplasmic space
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03002
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015920 lipopolysaccharide transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03002
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA IPR014340 Lipopolysaccharide export system protein LptA 47 203 7.4E-44
Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. IPR014340 Lipopolysaccharide export system protein LptA 27 203 26.495
MobiDBLite mobidb-lite consensus disorder prediction 201 229 -
MobiDBLite mobidb-lite consensus disorder prediction 215 229 -
Gene3D G3DSA:2.60.450.10 49 205 1.1E-43
Pfam PF03968 OstA-like protein IPR005653 Organic solvent tolerance-like, N-terminal 57 176 3.5E-28

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.