Burkholderia cenocepacia J2315, BCAL0229 (rpsL)

Gene Feature Overview

Strain	Burkholderia cenocepacia J2315 GCF_000009485.1|latest
Locus Tag	BCAL0229
NCBI Locus Tag	QU43_RS37680
Name	rpsL
Replicon	chromosome 1
Genomic location	269972 - 270352 (+ strand)

Cross-References

RefSeq	WP_006400662.1
GI	206558636
Entrez	6934029
GI	206558636
INSDC	CAR50540.1
NCBI Locus Tag	QU43_RS37680
NCBI Old Locus Tag	BCAL0229
RefSeq	WP_006400662.1,GeneID
UniParc	UPI000052E3E7
UniProtKB Acc	B4E5B5
UniProtKB ID	RS12_BURCJ
UniRef100	UniRef100_B1YRC5
UniRef50	UniRef50_Q8KTP6
UniRef90	UniRef90_A4SUV6

Product

Feature Type	CDS
Coding Frame	1
Product Name	30S ribosomal protein S12
Synonyms
Evidence for Translation
Charge (pH 7)	20.64
Kyte-Doolittle Hydrophobicity Value	-0.803
Molecular Weight (kDa)	13999.2
Isoelectric Point (pI)	11.53

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 659 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG000253 (655 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BCAL0229 Search term: rpsL Search term: 30S ribosomal protein S12

Human Homologs

Ensembl 97, assembly GRCh38.p12	ENSP00000384952 mitochondrial ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10380] E-value: 5.4e-20 Percent Identity: 45.5
Ensembl 97, assembly GRCh38.p12	ENSP00000489467 mitochondrial ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10380] E-value: 5.4e-20 Percent Identity: 45.5
Ensembl 97, assembly GRCh38.p12	ENSP00000488926 mitochondrial ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10380] E-value: 5.4e-20 Percent Identity: 45.5
Ensembl 97, assembly GRCh38.p12	ENSP00000384579 mitochondrial ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10380] E-value: 5.4e-20 Percent Identity: 45.5
Ensembl 97, assembly GRCh38.p12	ENSP00000308845 mitochondrial ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10380] E-value: 5.4e-20 Percent Identity: 45.5
Ensembl 97, assembly GRCh38.p12	ENSP00000489374 mitochondrial ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10380] E-value: 5.4e-20 Percent Identity: 45.5

References