Burkholderia cenocepacia J2315, BCAL0229 (rpsL)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0006412	translation	ISM Inferred from Sequence Model Term mapped from: InterPro:MF_00403_B	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Cellular Component	GO:0005840	ribosome	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00164	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003735	structural constituent of ribosome	ISM Inferred from Sequence Model Term mapped from: InterPro:MF_00403_B	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Cellular Component	GO:0015935	small ribosomal subunit	ISM Inferred from Sequence Model Term mapped from: InterPro:MF_00403_B	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	bcj03010	Ribosome	73.0+/03-31, Mar 15	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
MobiDBLite	mobidb-lite	consensus disorder prediction			1	28	-
Gene3D	G3DSA:2.40.50.140				1	126	1.3E-63
MobiDBLite	mobidb-lite	consensus disorder prediction			1	24	-
Pfam	PF00164	Ribosomal protein S12/S23	IPR006032	Ribosomal protein S12/S23	12	123	6.0E-43
TIGRFAM	TIGR00981	rpsL_bact: ribosomal protein uS12	IPR005679	Ribosomal protein S12, bacterial-type	1	124	8.2E-71
SUPERFAMILY	SSF50249		IPR012340	Nucleic acid-binding, OB-fold	2	123	8.05E-52
PIRSF	PIRSF002133		IPR006032	Ribosomal protein S12/S23	1	124	7.6E-57
PRINTS	PR01034	Ribosomal protein S12 signature	IPR006032	Ribosomal protein S12/S23	94	110	1.4E-59
PRINTS	PR01034	Ribosomal protein S12 signature	IPR006032	Ribosomal protein S12/S23	42	57	1.4E-59
PRINTS	PR01034	Ribosomal protein S12 signature	IPR006032	Ribosomal protein S12/S23	110	122	1.4E-59
MobiDBLite	mobidb-lite	consensus disorder prediction			103	126	-
CDD	cd03368	Ribosomal_S12	IPR005679	Ribosomal protein S12, bacterial-type	3	110	2.23005E-68
Hamap	MF_00403_B	30S ribosomal protein S12 [rpsL].	IPR005679	Ribosomal protein S12, bacterial-type	1	123	39.857
PRINTS	PR01034	Ribosomal protein S12 signature	IPR006032	Ribosomal protein S12/S23	58	77	1.4E-59
ProSitePatterns	PS00055	Ribosomal protein S12 signature.	IPR006032	Ribosomal protein S12/S23	43	50	-
PRINTS	PR01034	Ribosomal protein S12 signature	IPR006032	Ribosomal protein S12/S23	27	42	1.4E-59
PRINTS	PR01034	Ribosomal protein S12 signature	IPR006032	Ribosomal protein S12/S23	77	94	1.4E-59

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.