Burkholderia cenocepacia J2315, BCAL0221 (nusG)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0032784 regulation of DNA-templated transcription, elongation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00948
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02357
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
ProSitePatterns PS01014 Transcription termination factor nusG signature. IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site 168 177 -
PRINTS PR00338 Transcription termination factor NUSG signature IPR001062 Transcription antitermination protein, NusG 143 158 4.3E-20
SUPERFAMILY SSF82679 IPR036735 NusG, N-terminal domain superfamily 11 121 2.62E-39
Gene3D G3DSA:2.30.30.30 IPR014722 Ribosomal protein L2, domain 2 126 185 5.4E-26
Pfam PF00467 KOW motif IPR005824 KOW 134 166 1.8E-7
PRINTS PR00338 Transcription termination factor NUSG signature IPR001062 Transcription antitermination protein, NusG 161 177 4.3E-20
PRINTS PR00338 Transcription termination factor NUSG signature IPR001062 Transcription antitermination protein, NusG 65 77 4.3E-20
SUPERFAMILY SSF50104 IPR008991 Translation protein SH3-like domain superfamily 129 185 7.52E-20
Gene3D G3DSA:3.30.70.940 IPR036735 NusG, N-terminal domain superfamily 6 125 1.9E-48
SMART SM00739 IPR005824 KOW 131 158 7.7E-6
SMART SM00738 IPR006645 NusG, N-terminal 10 119 4.2E-47
Pfam PF02357 Transcription termination factor nusG IPR006645 NusG, N-terminal 11 116 4.3E-27
Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. IPR001062 Transcription antitermination protein, NusG 10 185 25.548
TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG IPR001062 Transcription antitermination protein, NusG 13 185 2.7E-69
CDD cd09891 NGN_Bact_1 12 119 1.75186E-57
CDD cd06091 KOW_NusG 129 184 5.70183E-25

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.