Burkholderia cenocepacia J2315, BCAL0210

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00440
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF46689 IPR009057 Homeobox-like domain superfamily 2 76 4.62E-17
PRINTS PR00455 TetR bacterial regulatory protein HTH signature IPR001647 DNA-binding HTH domain, TetR-type 37 60 6.7E-7
SUPERFAMILY SSF48498 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily 89 198 6.67E-11
Gene3D G3DSA:1.10.10.60 1 53 4.6E-19
Pfam PF17932 Tetracyclin repressor-like, C-terminal domain IPR041490 HTH-type transcriptional repressor KstR2, C-terminal 87 197 2.4E-20
PRINTS PR00455 TetR bacterial regulatory protein HTH signature IPR001647 DNA-binding HTH domain, TetR-type 16 29 6.7E-7
Gene3D G3DSA:1.10.357.10 54 199 1.9E-27
Pfam PF00440 Bacterial regulatory proteins, tetR family IPR001647 DNA-binding HTH domain, TetR-type 16 60 5.3E-12
ProSiteProfiles PS50977 TetR-type HTH domain profile. IPR001647 DNA-binding HTH domain, TetR-type 10 70 20.147

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.