Burkholderia cenocepacia J2315, BCAL0079 (rep)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006268 DNA unwinding involved in DNA replication
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01920
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01920
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS51198
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003678 DNA helicase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01920
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016787 hydrolase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF13361
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
MobiDBLite mobidb-lite consensus disorder prediction 665 684 -
Gene3D G3DSA:3.40.50.300 285 664 8.0E-110
Pfam PF00580 UvrD/REP helicase N-terminal domain IPR034739 UvrD/AddA helicase, N-terminal 5 276 7.0E-72
Gene3D G3DSA:1.10.10.160 IPR013986 DExx box DNA helicase domain superfamily 119 194 1.5E-88
ProSiteProfiles PS51198 UvrD-like DNA helicase ATP-binding domain profile. IPR014016 UvrD-like helicase, ATP-binding domain 3 291 50.669
Gene3D G3DSA:1.10.486.10 388 570 8.0E-110
Pfam PF13361 UvrD-like helicase C-terminal domain IPR014017 UvrD-like DNA helicase, C-terminal 282 645 6.9E-60
Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. IPR005752 ATP-dependent DNA helicase Rep 3 694 39.143
ProSiteProfiles PS51217 UvrD-like DNA helicase C-terminal domain profile. IPR014017 UvrD-like DNA helicase, C-terminal 292 588 23.96
Gene3D G3DSA:3.40.50.300 5 278 1.5E-88
CDD cd18807 SF1_C_UvrD 578 641 5.24375E-26
SUPERFAMILY SSF52540 IPR027417 P-loop containing nucleoside triphosphate hydrolase 3 665 1.02E-156
CDD cd18807 SF1_C_UvrD 290 374 4.62955E-18
CDD cd17932 DEXQc_UvrD 6 288 1.17722E-80

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.