Burkholderia cenocepacia J2315, BCAL0073 (gcvP)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006546 glycine catabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00613
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006544 glycine metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00461
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055114 oxidation-reduction process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00613
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004375 glycine dehydrogenase (decarboxylating) activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00613
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.90.1150.10
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bcj01100 Metabolic pathways 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bcj00260 Glycine, serine and threonine metabolism 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG (InterPro) 00260 Glycine, serine and threonine metabolism InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG bcj01200 Carbon metabolism 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.640.10 IPR015421 Pyridoxal phosphate-dependent transferase, major domain 542 771 4.1E-60
CDD cd00613 GDC-P IPR020581 Glycine cleavage system P protein 500 890 1.56121E-150
SUPERFAMILY SSF53383 IPR015424 Pyridoxal phosphate-dependent transferase 29 457 9.0E-103
CDD cd00613 GDC-P IPR020581 Glycine cleavage system P protein 91 454 9.10342E-146
Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. IPR003437 Glycine dehydrogenase (decarboxylating) 20 974 25.873
SUPERFAMILY SSF53383 IPR015424 Pyridoxal phosphate-dependent transferase 496 969 1.16E-100
TIGRFAM TIGR00461 gcvP: glycine dehydrogenase IPR003437 Glycine dehydrogenase (decarboxylating) 29 968 0.0
Gene3D G3DSA:3.90.1150.10 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 782 922 4.4E-41
Pfam PF02347 Glycine cleavage system P-protein IPR020581 Glycine cleavage system P protein 28 454 1.2E-178
Gene3D G3DSA:3.40.640.10 IPR015421 Pyridoxal phosphate-dependent transferase, major domain 110 368 1.1E-108
Pfam PF02347 Glycine cleavage system P-protein IPR020581 Glycine cleavage system P protein 492 761 1.6E-11

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.