Burkholderia cenocepacia J2315, BCAL0048A

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS50977
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF46689 IPR009057 Homeobox-like domain superfamily 25 101 4.54E-17
Pfam PF00440 Bacterial regulatory proteins, tetR family IPR001647 DNA-binding HTH domain, TetR-type 44 82 4.6E-12
Gene3D G3DSA:1.10.357.10 22 221 1.1E-23
MobiDBLite mobidb-lite consensus disorder prediction 1 31 -
ProSitePatterns PS01081 TetR-type HTH domain signature. IPR023772 DNA-binding HTH domain, TetR-type, conserved site 51 81 -
MobiDBLite mobidb-lite consensus disorder prediction 1 18 -
PRINTS PR00455 TetR bacterial regulatory protein HTH signature IPR001647 DNA-binding HTH domain, TetR-type 39 52 1.2E-6
PRINTS PR00455 TetR bacterial regulatory protein HTH signature IPR001647 DNA-binding HTH domain, TetR-type 60 83 1.2E-6
ProSiteProfiles PS50977 TetR-type HTH domain profile. IPR001647 DNA-binding HTH domain, TetR-type 33 93 20.229

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.