Burkholderia pseudomallei K96243, BPSL3097 (tssM-1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0033103 protein secretion by the type VI secretion system
TAS
Traceable Author Statement
ECO:0000304
traceable author statement used in manual assertion
17660433 Reviewed by curator

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bps03070 Bacterial secretion system 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF14331 ImcF-related N-terminal domain IPR025743 IcmF-related, N-terminal domain 190 442 2.2E-82
Pfam PF06744 Type VI secretion protein IcmF C-terminal IPR010623 Type VI secretion system IcmF, C-terminal 1000 1202 1.2E-48
Pfam PF06761 Intracellular multiplication and human macrophage-killing IPR009612 IcmF-related 494 861 1.1E-95
SUPERFAMILY SSF52540 IPR027417 P-loop containing nucleoside triphosphate hydrolase 125 283 2.73E-7
MobiDBLite mobidb-lite consensus disorder prediction 1235 1275 -
TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF IPR017731 Type VI secretion system, IcmF 14 566 2.0E-137
MobiDBLite mobidb-lite consensus disorder prediction 1235 1254 -
Coils Coil 473 500 -
MobiDBLite mobidb-lite consensus disorder prediction 572 603 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.